Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 KRT19P1-201ENST00000405746 1186 ntBASIC18.58■□□□□ 0.56
TNFRSF1BP20333 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 MYCNOS-205ENST00000641950 531 ntBASIC18.58■□□□□ 0.56
TNFRSF1BP20333 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF1BP20333 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.57■□□□□ 0.56
TNFRSF1BP20333 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 AL356652.1-201ENST00000615962 565 ntBASIC18.57■□□□□ 0.56
TNFRSF1BP20333 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 TREX1-205ENST00000625293 1783 ntBASIC18.57■□□□□ 0.56
TNFRSF1BP20333 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFRSF1BP20333 AC018445.3-201ENST00000624177 1945 ntBASIC18.57■□□□□ 0.56
TNFRSF1BP20333 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 AP000974.1-201ENST00000623909 2387 ntBASIC18.56■□□□□ 0.56
TNFRSF1BP20333 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF1BP20333 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 AC093484.2-201ENST00000580996 2166 ntBASIC18.55■□□□□ 0.56
TNFRSF1BP20333 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 AC087633.2-202ENST00000565166 1439 ntBASIC18.55■□□□□ 0.56
TNFRSF1BP20333 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF1BP20333 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms