Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TCF4P15884 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TCF4P15884 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TCF4P15884 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.9■□□□□ 0.94
TCF4P15884 AF201337.1-201ENST00000520239 748 ntBASIC20.9■□□□□ 0.94
TCF4P15884 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.9■□□□□ 0.94
TCF4P15884 AL589743.5-201ENST00000616611 1050 ntBASIC20.9■□□□□ 0.94
TCF4P15884 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TCF4P15884 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCF4P15884 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TCF4P15884 MKRN4P-201ENST00000444706 1521 ntBASIC20.89■□□□□ 0.94
TCF4P15884 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.89■□□□□ 0.94
TCF4P15884 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.89■□□□□ 0.93
TCF4P15884 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TCF4P15884 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.89■□□□□ 0.93
TCF4P15884 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TCF4P15884 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.89■□□□□ 0.93
TCF4P15884 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCF4P15884 KRT8P17-201ENST00000453110 1448 ntBASIC20.88■□□□□ 0.93
TCF4P15884 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.88■□□□□ 0.93
TCF4P15884 C2orf69P4-201ENST00000565394 541 ntBASIC20.88■□□□□ 0.93
TCF4P15884 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
TCF4P15884 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.88■□□□□ 0.93
TCF4P15884 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.88■□□□□ 0.93
TCF4P15884 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.88■□□□□ 0.93
TCF4P15884 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TCF4P15884 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCF4P15884 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TCF4P15884 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.87■□□□□ 0.93
TCF4P15884 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.87■□□□□ 0.93
TCF4P15884 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
TCF4P15884 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
TCF4P15884 BX276092.2-201ENST00000417668 665 ntBASIC20.87■□□□□ 0.93
TCF4P15884 GUSBP6-202ENST00000438529 1198 ntBASIC20.87■□□□□ 0.93
TCF4P15884 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.87■□□□□ 0.93
TCF4P15884 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.87■□□□□ 0.93
TCF4P15884 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.87■□□□□ 0.93
TCF4P15884 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCF4P15884 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCF4P15884 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCF4P15884 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCF4P15884 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCF4P15884 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.86■□□□□ 0.93
TCF4P15884 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.86■□□□□ 0.93
TCF4P15884 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.86■□□□□ 0.93
TCF4P15884 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.86■□□□□ 0.93
TCF4P15884 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.86■□□□□ 0.93
TCF4P15884 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.86■□□□□ 0.93
TCF4P15884 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TCF4P15884 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.86■□□□□ 0.93
TCF4P15884 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.86■□□□□ 0.93
TCF4P15884 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCF4P15884 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
TCF4P15884 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.85■□□□□ 0.93
TCF4P15884 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TCF4P15884 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.85■□□□□ 0.93
TCF4P15884 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.85■□□□□ 0.93
TCF4P15884 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCF4P15884 AC083906.2-201ENST00000511578 360 ntBASIC20.85■□□□□ 0.93
TCF4P15884 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
TCF4P15884 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TCF4P15884 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms