Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.54■□□□□ 0.88
BRAFP15056 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.54■□□□□ 0.88
BRAFP15056 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.54■□□□□ 0.88
BRAFP15056 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.54■□□□□ 0.88
BRAFP15056 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.53■□□□□ 0.88
BRAFP15056 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.53■□□□□ 0.88
BRAFP15056 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
BRAFP15056 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BRAFP15056 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.53■□□□□ 0.88
BRAFP15056 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRAFP15056 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.52■□□□□ 0.88
BRAFP15056 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.52■□□□□ 0.88
BRAFP15056 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.52■□□□□ 0.88
BRAFP15056 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.52■□□□□ 0.88
BRAFP15056 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.52■□□□□ 0.88
BRAFP15056 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 CNN2P6-201ENST00000439038 900 ntBASIC20.52■□□□□ 0.88
BRAFP15056 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.52■□□□□ 0.88
BRAFP15056 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.52■□□□□ 0.88
BRAFP15056 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRAFP15056 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.52■□□□□ 0.88
BRAFP15056 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRAFP15056 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BRAFP15056 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.51■□□□□ 0.87
BRAFP15056 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
BRAFP15056 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.51■□□□□ 0.87
BRAFP15056 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.51■□□□□ 0.87
BRAFP15056 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.51■□□□□ 0.87
BRAFP15056 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BRAFP15056 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRAFP15056 KRT16P2-201ENST00000414673 1423 ntBASIC20.51■□□□□ 0.87
BRAFP15056 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.51■□□□□ 0.87
BRAFP15056 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.51■□□□□ 0.87
BRAFP15056 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.5■□□□□ 0.87
BRAFP15056 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
BRAFP15056 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BRAFP15056 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 AP000974.1-201ENST00000623909 2387 ntBASIC20.5■□□□□ 0.87
BRAFP15056 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
BRAFP15056 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 AC120498.10-201ENST00000621827 505 ntBASIC20.5■□□□□ 0.87
BRAFP15056 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.5■□□□□ 0.87
BRAFP15056 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms