Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC008694.1-202ENST00000636953 945 ntBASIC21.03■□□□□ 0.96
RARAP10276 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.03■□□□□ 0.96
RARAP10276 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.03■□□□□ 0.96
RARAP10276 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
RARAP10276 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RARAP10276 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RARAP10276 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.02■□□□□ 0.96
RARAP10276 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RARAP10276 AL158211.5-201ENST00000623583 2518 ntBASIC21.02■□□□□ 0.96
RARAP10276 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARAP10276 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.02■□□□□ 0.96
RARAP10276 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RARAP10276 OR10C1-204ENST00000622521 1039 ntBASIC21.02■□□□□ 0.96
RARAP10276 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARAP10276 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RARAP10276 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
RARAP10276 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RARAP10276 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 KRT18P68-201ENST00000392293 1000 ntBASIC21.01■□□□□ 0.95
RARAP10276 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.01■□□□□ 0.95
RARAP10276 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.01■□□□□ 0.95
RARAP10276 AL355472.2-201ENST00000422958 438 ntBASIC21.01■□□□□ 0.95
RARAP10276 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 AC093787.1-201ENST00000450396 207 ntBASIC21.01■□□□□ 0.95
RARAP10276 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.01■□□□□ 0.95
RARAP10276 CYP2T3P-201ENST00000601990 817 ntBASIC21.01■□□□□ 0.95
RARAP10276 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RARAP10276 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.01■□□□□ 0.95
RARAP10276 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARAP10276 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21■□□□□ 0.95
RARAP10276 AL691432.2-201ENST00000607222 2038 ntBASIC21■□□□□ 0.95
RARAP10276 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RARAP10276 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21■□□□□ 0.95
RARAP10276 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21■□□□□ 0.95
RARAP10276 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RARAP10276 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21■□□□□ 0.95
RARAP10276 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21■□□□□ 0.95
RARAP10276 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21■□□□□ 0.95
RARAP10276 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 AC010980.2-201ENST00000587099 1412 ntBASIC21■□□□□ 0.95
RARAP10276 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21■□□□□ 0.95
RARAP10276 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 AL020996.1-203ENST00000536896 2307 ntBASIC21■□□□□ 0.95
RARAP10276 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21■□□□□ 0.95
RARAP10276 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARAP10276 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RARAP10276 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.99■□□□□ 0.95
RARAP10276 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RARAP10276 AC105020.6-201ENST00000621523 1217 ntBASIC20.99■□□□□ 0.95
RARAP10276 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RARAP10276 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.99■□□□□ 0.95
RARAP10276 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARAP10276 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 AC116562.4-201ENST00000641316 2276 ntBASIC20.98■□□□□ 0.95
RARAP10276 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RARAP10276 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms