Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV3P03979 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 AP005212.1-201ENST00000581547 1997 ntBASIC15.75■□□□□ 0.11
TRGV3P03979 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV3P03979 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRGV3P03979 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.75■□□□□ 0.11
TRGV3P03979 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV3P03979 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV3P03979 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
TRGV3P03979 AC098934.4-201ENST00000564127 592 ntBASIC15.75■□□□□ 0.11
TRGV3P03979 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV3P03979 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV3P03979 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV3P03979 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRGV3P03979 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV3P03979 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV3P03979 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 AC073210.2-201ENST00000430369 194 ntBASIC15.74■□□□□ 0.11
TRGV3P03979 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.74■□□□□ 0.11
TRGV3P03979 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV3P03979 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV3P03979 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
TRGV3P03979 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRGV3P03979 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRGV3P03979 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV3P03979 GABARAPL3-202ENST00000624044 1851 ntBASIC15.74■□□□□ 0.11
TRGV3P03979 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 LINC01006-201ENST00000333319 2292 ntBASIC15.73■□□□□ 0.11
TRGV3P03979 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV3P03979 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.73■□□□□ 0.11
TRGV3P03979 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV3P03979 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV3P03979 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV3P03979 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRGV3P03979 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV3P03979 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 AC092667.1-201ENST00000434301 2586 ntBASIC15.72■□□□□ 0.11
TRGV3P03979 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRGV3P03979 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRGV3P03979 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRGV3P03979 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.72■□□□□ 0.11
TRGV3P03979 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV3P03979 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV3P03979 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms