Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
HLA-DQB1P01920 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 AC233992.3-201ENST00000607491 485 ntBASIC17.29■□□□□ 0.36
HLA-DQB1P01920 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 PCDHB18P-201ENST00000524813 2368 ntBASIC17.29■□□□□ 0.36
HLA-DQB1P01920 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DQB1P01920 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 AC009113.1-201ENST00000570267 2443 ntBASIC17.28■□□□□ 0.36
HLA-DQB1P01920 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 MIR4767-201ENST00000582827 78 ntBASIC17.28■□□□□ 0.36
HLA-DQB1P01920 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 RARRES2P11-201ENST00000635158 484 ntBASIC17.28■□□□□ 0.36
HLA-DQB1P01920 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 AP000997.3-201ENST00000623333 2250 ntBASIC17.28■□□□□ 0.36
HLA-DQB1P01920 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB1P01920 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB1P01920 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB1P01920 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB1P01920 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB1P01920 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB1P01920 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 UNC93B3-201ENST00000308076 687 ntBASIC17.26■□□□□ 0.35
HLA-DQB1P01920 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms