Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.86■□□□□ 0.93
LRCH4O75427 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LRCH4O75427 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LRCH4O75427 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.86■□□□□ 0.93
LRCH4O75427 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LRCH4O75427 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LRCH4O75427 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.86■□□□□ 0.93
LRCH4O75427 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.86■□□□□ 0.93
LRCH4O75427 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRCH4O75427 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRCH4O75427 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH4O75427 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.86■□□□□ 0.93
LRCH4O75427 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.85■□□□□ 0.93
LRCH4O75427 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LRCH4O75427 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.85■□□□□ 0.93
LRCH4O75427 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.85■□□□□ 0.93
LRCH4O75427 GPX1P1-201ENST00000388829 606 ntBASIC20.85■□□□□ 0.93
LRCH4O75427 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.85■□□□□ 0.93
LRCH4O75427 AC023632.3-201ENST00000521633 145 ntBASIC20.85■□□□□ 0.93
LRCH4O75427 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.85■□□□□ 0.93
LRCH4O75427 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.85■□□□□ 0.93
LRCH4O75427 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.85■□□□□ 0.93
LRCH4O75427 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH4O75427 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LRCH4O75427 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.84■□□□□ 0.93
LRCH4O75427 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRCH4O75427 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
LRCH4O75427 TSPY6P-201ENST00000448518 926 ntBASIC20.84■□□□□ 0.93
LRCH4O75427 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRCH4O75427 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.84■□□□□ 0.93
LRCH4O75427 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.84■□□□□ 0.93
LRCH4O75427 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
LRCH4O75427 TMEM179-206ENST00000616017 1645 ntBASIC20.84■□□□□ 0.93
LRCH4O75427 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH4O75427 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LRCH4O75427 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH4O75427 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH4O75427 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH4O75427 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH4O75427 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LRCH4O75427 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.83■□□□□ 0.93
LRCH4O75427 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.83■□□□□ 0.93
LRCH4O75427 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.83■□□□□ 0.93
LRCH4O75427 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRCH4O75427 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRCH4O75427 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRCH4O75427 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.82■□□□□ 0.92
LRCH4O75427 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
LRCH4O75427 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 KRT16P6-202ENST00000425692 1426 ntBASIC20.82■□□□□ 0.92
LRCH4O75427 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH4O75427 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.82■□□□□ 0.92
LRCH4O75427 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.82■□□□□ 0.92
LRCH4O75427 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.82■□□□□ 0.92
LRCH4O75427 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.82■□□□□ 0.92
LRCH4O75427 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.82■□□□□ 0.92
LRCH4O75427 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
LRCH4O75427 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms