Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CACNA1FO60840 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 RPPH1-201ENST00000516869 333 ntBASIC25.35■■□□□ 1.65
CACNA1FO60840 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.35■■□□□ 1.65
CACNA1FO60840 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CACNA1FO60840 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.35■■□□□ 1.65
CACNA1FO60840 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CACNA1FO60840 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.35■■□□□ 1.65
CACNA1FO60840 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.35■■□□□ 1.65
CACNA1FO60840 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
CACNA1FO60840 AL691432.2-201ENST00000607222 2038 ntBASIC25.34■■□□□ 1.65
CACNA1FO60840 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.34■■□□□ 1.65
CACNA1FO60840 AL157384.1-201ENST00000445995 2473 ntBASIC25.34■■□□□ 1.65
CACNA1FO60840 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CACNA1FO60840 AC018553.1-201ENST00000616682 1458 ntBASIC25.34■■□□□ 1.65
CACNA1FO60840 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.34■■□□□ 1.65
CACNA1FO60840 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.34■■□□□ 1.65
CACNA1FO60840 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.34■■□□□ 1.65
CACNA1FO60840 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CACNA1FO60840 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CACNA1FO60840 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CACNA1FO60840 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.34■■□□□ 1.65
CACNA1FO60840 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CACNA1FO60840 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.34■■□□□ 1.65
CACNA1FO60840 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.33■■□□□ 1.65
CACNA1FO60840 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.33■■□□□ 1.65
CACNA1FO60840 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CACNA1FO60840 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CACNA1FO60840 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CACNA1FO60840 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CACNA1FO60840 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.33■■□□□ 1.65
CACNA1FO60840 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.33■■□□□ 1.65
CACNA1FO60840 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.33■■□□□ 1.65
CACNA1FO60840 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CACNA1FO60840 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CACNA1FO60840 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CACNA1FO60840 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
CACNA1FO60840 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CACNA1FO60840 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CACNA1FO60840 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CACNA1FO60840 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
CACNA1FO60840 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CACNA1FO60840 LINC01521-201ENST00000504184 1943 ntBASIC25.32■■□□□ 1.64
CACNA1FO60840 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.32■■□□□ 1.64
CACNA1FO60840 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.32■■□□□ 1.64
CACNA1FO60840 AL353708.3-201ENST00000610272 989 ntBASIC25.32■■□□□ 1.64
CACNA1FO60840 AC066615.1-201ENST00000640911 628 ntBASIC25.32■■□□□ 1.64
CACNA1FO60840 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.32■■□□□ 1.64
CACNA1FO60840 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CACNA1FO60840 KRT16P6-202ENST00000425692 1426 ntBASIC25.32■■□□□ 1.64
CACNA1FO60840 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.32■■□□□ 1.64
CACNA1FO60840 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.32■■□□□ 1.64
CACNA1FO60840 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CACNA1FO60840 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CACNA1FO60840 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CACNA1FO60840 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.31■■□□□ 1.64
CACNA1FO60840 TCF3P1-201ENST00000423021 1937 ntBASIC25.31■■□□□ 1.64
CACNA1FO60840 AC099778.1-201ENST00000568593 1911 ntBASIC25.31■■□□□ 1.64
CACNA1FO60840 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.31■■□□□ 1.64
CACNA1FO60840 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 KRASP1-201ENST00000407852 552 ntBASIC25.31■■□□□ 1.64
CACNA1FO60840 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CACNA1FO60840 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
CACNA1FO60840 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CACNA1FO60840 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
CACNA1FO60840 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
CACNA1FO60840 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CACNA1FO60840 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.31■■□□□ 1.64
CACNA1FO60840 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.3■■□□□ 1.64
CACNA1FO60840 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.3■■□□□ 1.64
CACNA1FO60840 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.3■■□□□ 1.64
CACNA1FO60840 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CACNA1FO60840 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.3■■□□□ 1.64
CACNA1FO60840 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.3■■□□□ 1.64
CACNA1FO60840 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.3■■□□□ 1.64
CACNA1FO60840 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CACNA1FO60840 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CACNA1FO60840 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.29■■□□□ 1.64
CACNA1FO60840 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.29■■□□□ 1.64
CACNA1FO60840 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms