Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH7O60245 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH7O60245 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH7O60245 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDH7O60245 AL691432.2-201ENST00000607222 2038 ntBASIC19.13■□□□□ 0.65
PCDH7O60245 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDH7O60245 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 PTBP1P-201ENST00000554374 1601 ntBASIC19.12■□□□□ 0.65
PCDH7O60245 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH7O60245 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH7O60245 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH7O60245 AC093787.1-201ENST00000450396 207 ntBASIC19.12■□□□□ 0.65
PCDH7O60245 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH7O60245 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 AC073111.5-205ENST00000641717 521 ntBASIC19.12■□□□□ 0.65
PCDH7O60245 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH7O60245 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH7O60245 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PCDH7O60245 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH7O60245 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDH7O60245 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 AL589743.5-201ENST00000616611 1050 ntBASIC19.11■□□□□ 0.65
PCDH7O60245 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.11■□□□□ 0.65
PCDH7O60245 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH7O60245 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH7O60245 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH7O60245 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH7O60245 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH7O60245 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 AL137784.2-201ENST00000607332 1000 ntBASIC19.1■□□□□ 0.65
PCDH7O60245 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH7O60245 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH7O60245 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDH7O60245 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH7O60245 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH7O60245 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH7O60245 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH7O60245 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 AL512625.2-201ENST00000417533 625 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms