Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
MSH5O43196 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
MSH5O43196 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.94■■□□□ 1.9
MSH5O43196 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.94■■□□□ 1.9
MSH5O43196 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
MSH5O43196 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC26.94■■□□□ 1.9
MSH5O43196 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 CYP2T3P-201ENST00000601990 817 ntBASIC26.94■■□□□ 1.9
MSH5O43196 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC26.94■■□□□ 1.9
MSH5O43196 AC144521.1-201ENST00000607148 956 ntBASIC26.94■■□□□ 1.9
MSH5O43196 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH5O43196 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.93■■□□□ 1.9
MSH5O43196 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.93■■□□□ 1.9
MSH5O43196 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.93■■□□□ 1.9
MSH5O43196 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC26.93■■□□□ 1.9
MSH5O43196 OR2X1P-201ENST00000421144 687 ntBASIC26.93■■□□□ 1.9
MSH5O43196 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC26.93■■□□□ 1.9
MSH5O43196 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.93■■□□□ 1.9
MSH5O43196 KRT17P1-201ENST00000399211 1546 ntBASIC26.93■■□□□ 1.9
MSH5O43196 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.93■■□□□ 1.9
MSH5O43196 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 AC244015.2-201ENST00000616358 1861 ntBASIC26.93■■□□□ 1.9
MSH5O43196 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSH5O43196 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
MSH5O43196 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.92■■□□□ 1.9
MSH5O43196 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.92■■□□□ 1.9
MSH5O43196 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MSH5O43196 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
MSH5O43196 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MSH5O43196 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC26.92■■□□□ 1.9
MSH5O43196 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.92■■□□□ 1.9
MSH5O43196 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MSH5O43196 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.92■■□□□ 1.9
MSH5O43196 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.92■■□□□ 1.9
MSH5O43196 AC060766.5-201ENST00000590539 871 ntBASIC26.92■■□□□ 1.9
MSH5O43196 AC006963.1-201ENST00000624003 1052 ntBASIC26.92■■□□□ 1.9
MSH5O43196 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.92■■□□□ 1.9
MSH5O43196 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.92■■□□□ 1.9
MSH5O43196 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MSH5O43196 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
MSH5O43196 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
MSH5O43196 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.91■■□□□ 1.9
MSH5O43196 KRT17P3-201ENST00000420566 1262 ntBASIC26.91■■□□□ 1.9
MSH5O43196 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
MSH5O43196 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC26.91■■□□□ 1.9
MSH5O43196 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.91■■□□□ 1.9
MSH5O43196 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.91■■□□□ 1.9
MSH5O43196 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.91■■□□□ 1.9
MSH5O43196 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.91■■□□□ 1.9
MSH5O43196 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
MSH5O43196 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
MSH5O43196 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.91■■□□□ 1.9
MSH5O43196 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MSH5O43196 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC26.9■■□□□ 1.9
MSH5O43196 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC26.9■■□□□ 1.9
MSH5O43196 AC007919.2-201ENST00000444110 511 ntBASIC26.9■■□□□ 1.9
MSH5O43196 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.9■■□□□ 1.9
MSH5O43196 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.9■■□□□ 1.9
MSH5O43196 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH5O43196 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.9■■□□□ 1.9
MSH5O43196 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
MSH5O43196 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.89■■□□□ 1.9
MSH5O43196 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
MSH5O43196 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MSH5O43196 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MSH5O43196 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
MSH5O43196 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.89■■□□□ 1.9
MSH5O43196 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC26.89■■□□□ 1.9
MSH5O43196 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.89■■□□□ 1.9
MSH5O43196 AC110792.4-201ENST00000609843 298 ntBASIC26.89■■□□□ 1.9
MSH5O43196 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
MSH5O43196 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.88■■□□□ 1.89
MSH5O43196 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms