Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RRP8O43159 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.88■□□□□ 0.61
RRP8O43159 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RRP8O43159 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.88■□□□□ 0.61
RRP8O43159 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RRP8O43159 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 AC010203.1-204ENST00000548782 407 ntBASIC18.88■□□□□ 0.61
RRP8O43159 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.88■□□□□ 0.61
RRP8O43159 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.88■□□□□ 0.61
RRP8O43159 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RRP8O43159 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.88■□□□□ 0.61
RRP8O43159 AC026471.6-201ENST00000622954 1905 ntBASIC18.88■□□□□ 0.61
RRP8O43159 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.87■□□□□ 0.61
RRP8O43159 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RRP8O43159 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.87■□□□□ 0.61
RRP8O43159 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.87■□□□□ 0.61
RRP8O43159 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RRP8O43159 AC027702.1-201ENST00000563810 1770 ntBASIC18.87■□□□□ 0.61
RRP8O43159 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.87■□□□□ 0.61
RRP8O43159 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.87■□□□□ 0.61
RRP8O43159 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.87■□□□□ 0.61
RRP8O43159 AL358472.4-201ENST00000633140 710 ntBASIC18.87■□□□□ 0.61
RRP8O43159 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RRP8O43159 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.86■□□□□ 0.61
RRP8O43159 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RRP8O43159 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RRP8O43159 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RRP8O43159 AK4P3-201ENST00000418260 669 ntBASIC18.86■□□□□ 0.61
RRP8O43159 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.86■□□□□ 0.61
RRP8O43159 KRT18P56-201ENST00000507275 550 ntBASIC18.86■□□□□ 0.61
RRP8O43159 KRT126P-201ENST00000549467 1181 ntBASIC18.86■□□□□ 0.61
RRP8O43159 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RRP8O43159 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RRP8O43159 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RRP8O43159 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RRP8O43159 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.85■□□□□ 0.61
RRP8O43159 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.85■□□□□ 0.61
RRP8O43159 NIFKP9-201ENST00000419265 221 ntBASIC18.85■□□□□ 0.61
RRP8O43159 BX664615.1-201ENST00000443558 458 ntBASIC18.85■□□□□ 0.61
RRP8O43159 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RRP8O43159 AC128688.1-201ENST00000487626 519 ntBASIC18.85■□□□□ 0.61
RRP8O43159 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.85■□□□□ 0.61
RRP8O43159 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.85■□□□□ 0.61
RRP8O43159 AC006011.2-201ENST00000621313 1158 ntBASIC18.85■□□□□ 0.61
RRP8O43159 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.85■□□□□ 0.61
RRP8O43159 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.85■□□□□ 0.61
RRP8O43159 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RRP8O43159 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.85■□□□□ 0.61
RRP8O43159 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RRP8O43159 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RRP8O43159 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.84■□□□□ 0.61
RRP8O43159 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.84■□□□□ 0.61
RRP8O43159 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms