Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SPTLC1O15269 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SPTLC1O15269 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SPTLC1O15269 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SPTLC1O15269 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.45■■□□□ 1.02
SPTLC1O15269 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.45■■□□□ 1.02
SPTLC1O15269 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.45■■□□□ 1.02
SPTLC1O15269 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.45■■□□□ 1.02
SPTLC1O15269 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.45■■□□□ 1.02
SPTLC1O15269 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SPTLC1O15269 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SPTLC1O15269 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.45■■□□□ 1.02
SPTLC1O15269 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SPTLC1O15269 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPTLC1O15269 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.45■■□□□ 1.02
SPTLC1O15269 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 AC073314.1-201ENST00000568729 2216 ntBASIC21.44■■□□□ 1.02
SPTLC1O15269 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.44■■□□□ 1.02
SPTLC1O15269 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SPTLC1O15269 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.44■■□□□ 1.02
SPTLC1O15269 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.44■■□□□ 1.02
SPTLC1O15269 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SPTLC1O15269 AL023875.1-201ENST00000640777 796 ntBASIC21.44■■□□□ 1.02
SPTLC1O15269 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 KRT8P20-201ENST00000423953 1409 ntBASIC21.44■■□□□ 1.02
SPTLC1O15269 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
SPTLC1O15269 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPTLC1O15269 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.43■■□□□ 1.02
SPTLC1O15269 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SPTLC1O15269 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.43■■□□□ 1.02
SPTLC1O15269 MIR1224-201ENST00000408193 85 ntBASIC21.43■■□□□ 1.02
SPTLC1O15269 UBE2SP1-201ENST00000450587 669 ntBASIC21.43■■□□□ 1.02
SPTLC1O15269 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
SPTLC1O15269 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.43■■□□□ 1.02
SPTLC1O15269 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.43■■□□□ 1.02
SPTLC1O15269 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SPTLC1O15269 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SPTLC1O15269 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPTLC1O15269 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SPTLC1O15269 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 HLA-G-202ENST00000376815 851 ntBASIC21.42■■□□□ 1.02
SPTLC1O15269 HLA-G-203ENST00000376818 1127 ntBASIC21.42■■□□□ 1.02
SPTLC1O15269 MIR718-201ENST00000390190 70 ntBASIC21.42■■□□□ 1.02
SPTLC1O15269 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.42■■□□□ 1.02
SPTLC1O15269 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.42■■□□□ 1.02
SPTLC1O15269 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SPTLC1O15269 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.42■■□□□ 1.02
SPTLC1O15269 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.42■■□□□ 1.02
SPTLC1O15269 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.42■■□□□ 1.02
SPTLC1O15269 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.42■■□□□ 1.02
SPTLC1O15269 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SPTLC1O15269 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPTLC1O15269 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SPTLC1O15269 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.41■■□□□ 1.02
SPTLC1O15269 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SPTLC1O15269 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
SPTLC1O15269 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms