Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19■□□□□ 0.63
UPK1AO00322 CYP2T1P-201ENST00000432607 1285 ntBASIC19■□□□□ 0.63
UPK1AO00322 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19■□□□□ 0.63
UPK1AO00322 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19■□□□□ 0.63
UPK1AO00322 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19■□□□□ 0.63
UPK1AO00322 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19■□□□□ 0.63
UPK1AO00322 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19■□□□□ 0.63
UPK1AO00322 AP000974.1-201ENST00000623909 2387 ntBASIC19■□□□□ 0.63
UPK1AO00322 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UPK1AO00322 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.99■□□□□ 0.63
UPK1AO00322 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.99■□□□□ 0.63
UPK1AO00322 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
UPK1AO00322 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.99■□□□□ 0.63
UPK1AO00322 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UPK1AO00322 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.99■□□□□ 0.63
UPK1AO00322 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.99■□□□□ 0.63
UPK1AO00322 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.99■□□□□ 0.63
UPK1AO00322 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
UPK1AO00322 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1AO00322 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK1AO00322 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK1AO00322 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK1AO00322 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.98■□□□□ 0.63
UPK1AO00322 PGM5P4-201ENST00000421970 445 ntBASIC18.98■□□□□ 0.63
UPK1AO00322 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK1AO00322 AC069236.1-201ENST00000604339 616 ntBASIC18.98■□□□□ 0.63
UPK1AO00322 AL356652.1-201ENST00000615962 565 ntBASIC18.98■□□□□ 0.63
UPK1AO00322 AC100791.3-201ENST00000617619 330 ntBASIC18.98■□□□□ 0.63
UPK1AO00322 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.98■□□□□ 0.63
UPK1AO00322 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
UPK1AO00322 AC073111.5-205ENST00000641717 521 ntBASIC18.98■□□□□ 0.63
UPK1AO00322 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UPK1AO00322 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UPK1AO00322 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
UPK1AO00322 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1AO00322 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
UPK1AO00322 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1AO00322 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
UPK1AO00322 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 CDCA4P2-201ENST00000441182 718 ntBASIC18.97■□□□□ 0.63
UPK1AO00322 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1AO00322 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.97■□□□□ 0.63
UPK1AO00322 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UPK1AO00322 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1AO00322 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1AO00322 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.97■□□□□ 0.63
UPK1AO00322 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 TNXA-203ENST00000507684 2038 ntBASIC18.96■□□□□ 0.63
UPK1AO00322 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
UPK1AO00322 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 MCRIP2P1-201ENST00000394346 511 ntBASIC18.96■□□□□ 0.63
UPK1AO00322 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.96■□□□□ 0.63
UPK1AO00322 AC005181.1-201ENST00000604782 1256 ntBASIC18.96■□□□□ 0.63
UPK1AO00322 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms