Protein–RNA interactions for Protein: E5RIL1

UPK3BL2, Uroplakin-3b-like protein 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL2E5RIL1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 AC005829.2-201ENST00000571422 1056 ntBASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
UPK3BL2E5RIL1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 AC133681.1-201ENST00000465482 601 ntBASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.24■□□□□ 0.83
UPK3BL2E5RIL1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 AL390719.1-204ENST00000412397 1219 ntBASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 AL135905.2-201ENST00000584934 1404 ntBASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 AC097493.4-201ENST00000641197 219 ntBASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3BL2E5RIL1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 AC023632.3-201ENST00000521633 145 ntBASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3BL2E5RIL1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 AC012306.2-201ENST00000609350 630 ntBASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 AC006557.6-201ENST00000623071 864 ntBASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 AL049637.2-201ENST00000641778 930 ntBASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
UPK3BL2E5RIL1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK3BL2E5RIL1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK3BL2E5RIL1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms