Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 YBX1P1-201ENST00000445822 960 ntBASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 KRT18P14-201ENST00000534205 1250 ntBASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM49D1C9J1S8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 AC097381.1-201ENST00000429019 1296 ntBASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 AL356652.1-201ENST00000615962 565 ntBASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM49D1C9J1S8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49D1C9J1S8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.02■□□□□ 0.79
TRIM49D1C9J1S8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49D1C9J1S8 AC087633.2-202ENST00000565166 1439 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms