Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
MEIS3P1A6NDR6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MEIS3P1A6NDR6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
MEIS3P1A6NDR6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
MEIS3P1A6NDR6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 TMEM179-206ENST00000616017 1645 ntBASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 UNC93B3-201ENST00000308076 687 ntBASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 AC008764.7-201ENST00000593779 1081 ntBASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
MEIS3P1A6NDR6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 AC093503.3-201ENST00000624917 2352 ntBASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MEIS3P1A6NDR6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 AC008175.2-201ENST00000612840 297 ntBASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.12■□□□□ 0.33
MEIS3P1A6NDR6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 AC245052.3-201ENST00000450182 901 ntBASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 AC024257.2-201ENST00000549699 147 ntBASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms