Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 AC138907.5-202ENST00000569484 235 ntBASIC21.59■■□□□ 1.05
CCDC66A2RUB6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC66A2RUB6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 KRT16P2-201ENST00000414673 1423 ntBASIC21.58■■□□□ 1.05
CCDC66A2RUB6 AC142381.2-201ENST00000566120 298 ntBASIC21.58■■□□□ 1.05
CCDC66A2RUB6 MIR6084-201ENST00000622012 110 ntBASIC21.58■■□□□ 1.05
CCDC66A2RUB6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC66A2RUB6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC66A2RUB6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 RARRES2P11-201ENST00000635158 484 ntBASIC21.57■■□□□ 1.04
CCDC66A2RUB6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC66A2RUB6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 AC005332.8-201ENST00000622750 2735 ntBASIC21.56■■□□□ 1.04
CCDC66A2RUB6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 AL512408.1-201ENST00000569378 2000 ntBASIC21.56■■□□□ 1.04
CCDC66A2RUB6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC66A2RUB6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC66A2RUB6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 AC245052.3-201ENST00000450182 901 ntBASIC21.54■■□□□ 1.04
CCDC66A2RUB6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 AC120498.10-201ENST00000621827 505 ntBASIC21.54■■□□□ 1.04
CCDC66A2RUB6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms