Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
HFM1A2PYH4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HFM1A2PYH4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 AC116351.2-201ENST00000606540 1585 ntBASIC29.77■■■□□ 2.36
HFM1A2PYH4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HFM1A2PYH4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 AP006294.2-201ENST00000641667 209 ntBASIC29.77■■■□□ 2.36
HFM1A2PYH4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HFM1A2PYH4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.77■■■□□ 2.36
HFM1A2PYH4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
HFM1A2PYH4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
HFM1A2PYH4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 AL512408.1-201ENST00000569378 2000 ntBASIC29.76■■■□□ 2.35
HFM1A2PYH4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
HFM1A2PYH4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
HFM1A2PYH4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
HFM1A2PYH4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 FAM197Y4-202ENST00000622692 608 ntBASIC29.75■■■□□ 2.35
HFM1A2PYH4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HFM1A2PYH4 MME-217ENST00000616757 1315 ntTSL 5 BASIC29.75■■■□□ 2.35
HFM1A2PYH4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
HFM1A2PYH4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 AC008550.1-201ENST00000511500 884 ntBASIC29.74■■■□□ 2.35
HFM1A2PYH4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
HFM1A2PYH4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
HFM1A2PYH4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
HFM1A2PYH4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.74■■■□□ 2.35
HFM1A2PYH4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
HFM1A2PYH4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
HFM1A2PYH4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
HFM1A2PYH4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC29.73■■■□□ 2.35
HFM1A2PYH4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
HFM1A2PYH4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
HFM1A2PYH4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HFM1A2PYH4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC29.72■■■□□ 2.35
HFM1A2PYH4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 AC110285.5-201ENST00000611501 352 ntBASIC29.71■■■□□ 2.35
HFM1A2PYH4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HFM1A2PYH4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HFM1A2PYH4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HFM1A2PYH4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 KRT16P6-202ENST00000425692 1426 ntBASIC29.71■■■□□ 2.35
HFM1A2PYH4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 AC012618.2-201ENST00000428058 849 ntBASIC29.71■■■□□ 2.35
HFM1A2PYH4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
HFM1A2PYH4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC29.71■■■□□ 2.35
HFM1A2PYH4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.7■■■□□ 2.35
HFM1A2PYH4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC29.7■■■□□ 2.35
HFM1A2PYH4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
HFM1A2PYH4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
HFM1A2PYH4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
HFM1A2PYH4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms