Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 YBX1P1-201ENST00000445822 960 ntBASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV21A0A0B4J279 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 BX119927.1-201ENST00000636596 1552 ntBASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV21A0A0B4J279 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 KRT19P1-201ENST00000405746 1186 ntBASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 AC019069.1-201ENST00000610008 1333 ntBASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV21A0A0B4J279 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV21A0A0B4J279 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV21A0A0B4J279 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV21A0A0B4J279 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV21A0A0B4J279 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV21A0A0B4J279 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms