Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 PTBP1P-201ENST00000554374 1601 ntBASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 AC092667.1-201ENST00000434301 2586 ntBASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV41A0A0B4J266 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 CD99P1-205ENST00000527459 561 ntBASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 AC005829.2-201ENST00000571422 1056 ntBASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV41A0A0B4J266 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV41A0A0B4J266 LINC01521-201ENST00000504184 1943 ntBASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms