Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC005614.1-201ENST00000598952 3653 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 SNORA73B-201ENST00000363217 204 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 CDK7P1-201ENST00000434574 693 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AL139135.2-201ENST00000445040 433 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AL359839.1-201ENST00000451975 1160 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 RN7SL308P-201ENST00000464971 297 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 RN7SL314P-201ENST00000490735 292 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC008040.4-201ENST00000494834 768 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 SAA3P-201ENST00000533267 365 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 MTATP6P25-201ENST00000574491 261 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 NDUFA3P1-201ENST00000588007 252 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 RPS28P1-201ENST00000604589 187 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC098590.2-201ENST00000614787 281 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AP003119.3-201ENST00000566747 4192 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC106872.6-201ENST00000514228 1346 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 OR52K3P-202ENST00000641797 1729 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 Y_RNA.209-201ENST00000364156 111 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 SNORD15A-201ENST00000384214 148 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 FTOP1-201ENST00000419363 861 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC023141.1-201ENST00000419418 379 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 FDPSP1-201ENST00000424976 1071 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 ARL4AP4-201ENST00000434170 518 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 RPL5P27-201ENST00000437011 881 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 ARMC8P1-201ENST00000443069 1289 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AL591379.2-201ENST00000450223 397 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 RN7SL251P-201ENST00000464175 297 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 RN7SL791P-201ENST00000467868 295 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 RN7SL815P-201ENST00000470970 290 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 MTCO3P42-201ENST00000509488 518 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 MTCO3P39-201ENST00000514812 518 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC068631.3-201ENST00000538831 225 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms