Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 TRIM53CP-201ENST00000531490 1354 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 CASC19-280ENST00000642102 1351 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 ZNF300P1-201ENST00000356555 1822 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL353622.1-201ENST00000604716 1945 ntBASIC9.46□□□□□ -0.89
ALDH1A1P00352 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 AC093904.4-201ENST00000565044 3273 ntBASIC9.46□□□□□ -0.89
ALDH1A1P00352 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALDH1A1P00352 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALDH1A1P00352 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 AC008817.1-201ENST00000504215 1562 ntBASIC9.46□□□□□ -0.89
ALDH1A1P00352 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ALDH1A1P00352 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALDH1A1P00352 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
ALDH1A1P00352 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALDH1A1P00352 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL139274.1-201ENST00000402374 936 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL671986.1-201ENST00000422197 955 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC009299.1-201ENST00000429684 717 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC098828.1-201ENST00000436164 440 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 MTCO1P48-201ENST00000448024 1096 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 TCEAL4P1-201ENST00000453620 588 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 MTCYBP1-201ENST00000454315 1119 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 CHIAP1-201ENST00000456220 995 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC004801.2-201ENST00000468202 779 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC034244.1-201ENST00000507687 207 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC106774.2-201ENST00000510266 406 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 KRT18P54-201ENST00000513396 748 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC117383.2-201ENST00000514722 322 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC027104.1-201ENST00000563702 681 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC007346.2-201ENST00000564816 892 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 BUB1P1-201ENST00000603541 607 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 RPLP0P2-206ENST00000496593 3525 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 C11orf57-209ENST00000532163 3739 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 DTL-206ENST00000542077 4471 ntTSL 2 BASIC9.46□□□□□ -0.9
ALDH1A1P00352 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALDH1A1P00352 AL157713.1-201ENST00000379752 1531 ntBASIC9.46□□□□□ -0.9
ALDH1A1P00352 AC092645.1-201ENST00000624058 2272 ntBASIC9.45□□□□□ -0.9
ALDH1A1P00352 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALDH1A1P00352 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.45□□□□□ -0.9
ALDH1A1P00352 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms