Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC063952.1-203ENST00000634410 658 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 OFD1P17-201ENST00000437639 3018 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 OR4G1P-202ENST00000641173 1788 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.36□□□□□ -1.39
SSX3Q99909 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 ZNF887P-201ENST00000431363 1407 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 SNORA30-201ENST00000384028 129 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AL080285.1-201ENST00000404225 984 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 OR10U1P-201ENST00000414690 905 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC6.36□□□□□ -1.39
SSX3Q99909 NPM1P30-201ENST00000425092 828 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX3Q99909 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AC239860.1-201ENST00000444680 1270 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 RPS2P25-201ENST00000467247 580 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AC127024.1-201ENST00000490847 418 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 RN7SL124P-201ENST00000498656 285 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AC114300.1-201ENST00000502347 280 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AC114801.1-201ENST00000512633 297 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 CARD8-214ENST00000520007 614 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 OR5D2P-201ENST00000524390 911 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 OR7E1P-201ENST00000533891 958 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 AP006296.1-201ENST00000537438 499 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX3Q99909 AL137190.1-201ENST00000603288 282 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 AC239600.2-201ENST00000619615 1165 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 CASC19-212ENST00000641153 1287 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 SMG1P1-202ENST00000309865 4223 ntBASIC6.36□□□□□ -1.39
SSX3Q99909 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX3Q99909 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
SSX3Q99909 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSX3Q99909 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX3Q99909 AP004289.1-201ENST00000436307 2205 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 AC006600.2-201ENST00000624834 2506 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 TRIM51FP-201ENST00000526452 1353 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms