Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC013410.1-201ENST00000436223 1232 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC087499.3-202ENST00000441215 1173 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AL021939.1-201ENST00000441868 886 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 SNRPGP9-201ENST00000456025 225 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC084024.2-201ENST00000503480 791 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 STMN1P2-201ENST00000508435 439 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 FTH1-207ENST00000532601 742 ntTSL 3 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC013553.2-201ENST00000604244 589 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC008277.2-201ENST00000605196 797 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC131902.3-201ENST00000611767 581 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC116003.3-201ENST00000612669 541 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC002550.2-201ENST00000621246 394 ntBASIC9.61□□□□□ -0.87
LRCH3Q96II8 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LRCH3Q96II8 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC9.61□□□□□ -0.87
LRCH3Q96II8 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 LINC00662-201ENST00000561521 2480 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL356317.1-201ENST00000396110 1436 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL022322.1-201ENST00000609162 1433 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 RNU1-8P-201ENST00000384328 165 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 RNU6-796P-201ENST00000391086 107 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TMSB10P1-201ENST00000415070 132 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 BMS1P10-201ENST00000443754 1120 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PYM1-204ENST00000454792 884 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 RPS2P25-201ENST00000467247 580 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL079303.1-201ENST00000486611 463 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 IGKV2D-14-201ENST00000522473 355 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AP001994.1-201ENST00000527539 826 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AP004607.5-201ENST00000532034 217 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC025918.2-201ENST00000558683 763 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 MIR4999-201ENST00000585029 91 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL159169.2-201ENST00000610061 1269 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 RN7SL3-201ENST00000610674 299 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC090617.9-201ENST00000623751 147 ntBASIC9.6□□□□□ -0.87
LRCH3Q96II8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms