Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
FREM3P0C091 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 Z83313.1-201ENST00000433780 718 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.63□□□□□ -1.35
FREM3P0C091 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.63□□□□□ -1.35
FREM3P0C091 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 RN7SL182P-201ENST00000496499 300 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.63□□□□□ -1.35
FREM3P0C091 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 NDUFA3P4-201ENST00000560814 250 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 MIR744-201ENST00000578242 98 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.63□□□□□ -1.35
FREM3P0C091 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 FKBP1AP4-201ENST00000631775 336 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.63□□□□□ -1.35
FREM3P0C091 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.63□□□□□ -1.35
FREM3P0C091 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 AL096816.1-201ENST00000623300 2920 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 TRIM51HP-202ENST00000530412 1823 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 SPATA31C2-201ENST00000324915 3777 ntBASIC6.63□□□□□ -1.35
FREM3P0C091 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
FREM3P0C091 RPL10P16-201ENST00000325000 645 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 RNA5SP238-201ENST00000365464 120 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 RPL5P6-201ENST00000425640 886 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 ANKRD54P1-201ENST00000433115 471 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 FTH1P20-201ENST00000434913 548 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC015820.1-201ENST00000473882 321 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.62□□□□□ -1.35
FREM3P0C091 RN7SL775P-201ENST00000498361 336 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AC022296.2-201ENST00000512424 202 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.62□□□□□ -1.35
FREM3P0C091 AL121782.1-201ENST00000611242 413 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AC138207.6-201ENST00000579164 1967 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 TPTE2P2-201ENST00000403471 1466 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.62□□□□□ -1.35
FREM3P0C091 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 AC018688.1-201ENST00000636528 1754 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 AC079178.2-201ENST00000439323 1624 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 SNORA11D-201ENST00000408548 128 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 SNORA11E-201ENST00000408778 128 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 SETP22-201ENST00000412243 957 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 MYO5BP3-201ENST00000431872 1279 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AL161626.1-201ENST00000441480 490 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 AC026336.1-201ENST00000466577 351 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 RN7SL791P-201ENST00000467868 295 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.62□□□□□ -1.35
FREM3P0C091 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.62□□□□□ -1.35
FREM3P0C091 PTCHD3P1-201ENST00000612350 537 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
FREM3P0C091 AC092999.1-201ENST00000624004 1924 ntBASIC6.62□□□□□ -1.35
FREM3P0C091 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.62□□□□□ -1.35
FREM3P0C091 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FREM3P0C091 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms