Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CICP10-201ENST00000439497 198 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC007000.1-201ENST00000453064 794 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 RN7SL239P-201ENST00000490061 300 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AP006587.2-201ENST00000530696 493 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 CHCHD3P2-201ENST00000550751 639 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 NUTF2P2-201ENST00000551207 384 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC093283.1-201ENST00000565306 1075 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC090415.1-201ENST00000581877 847 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 RN7SL178P-201ENST00000582930 304 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC012065.3-201ENST00000602736 439 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC139493.1-201ENST00000604368 397 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC233280.20-201ENST00000637412 416 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC110716.2-201ENST00000563865 3945 ntBASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC50Q8IVM0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AL513523.1-201ENST00000417868 1309 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC133644.1-201ENST00000398171 937 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 NUS1P4-201ENST00000401550 585 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 RPL34P29-201ENST00000491411 325 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 RNA5SP116-201ENST00000516132 98 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC100823.2-201ENST00000518337 699 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SRMP2-201ENST00000553832 916 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC105275.2-201ENST00000567907 711 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CARSP1-201ENST00000603171 889 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AC129492.5-201ENST00000603489 315 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AL021918.1-201ENST00000603933 236 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AL121583.1-201ENST00000612444 682 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 RPL36AP21-202ENST00000639134 430 ntBASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC50Q8IVM0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
CCDC50Q8IVM0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC50Q8IVM0 PPIAP22-201ENST00000358455 498 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 275.6 ms