Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 U3.31-201ENST00000408113 216 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC004986.1-201ENST00000414855 607 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 RAC1P4-201ENST00000419413 579 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 RNF11P2-201ENST00000427702 440 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 DDX11L10-201ENST00000430178 571 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 MORF4L1P5-201ENST00000433352 961 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC005550.2-201ENST00000476382 318 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC107956.2-201ENST00000496042 454 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AP004833.1-201ENST00000507987 1238 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC114801.1-201ENST00000512633 297 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 IGLVI-42-201ENST00000522485 381 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 OR7E87P-201ENST00000532397 929 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC244034.2-201ENST00000562504 509 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC022239.4-201ENST00000602626 504 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC139493.1-201ENST00000604368 397 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 SNORD46-201ENST00000364043 104 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RNU1-122P-201ENST00000365538 156 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 MIR640-201ENST00000385086 96 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RNA5SP18-201ENST00000390935 121 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RNA5SP297-201ENST00000391029 113 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 PCNAP3-201ENST00000397222 778 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RPL34P19-201ENST00000415903 342 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RPS13P2-201ENST00000437890 455 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RPL4P2-201ENST00000447259 1282 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 MRPS21P1-201ENST00000453850 223 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RN7SL153P-201ENST00000486501 292 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC127024.1-201ENST00000490847 418 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC023818.1-201ENST00000498379 384 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC108120.1-201ENST00000506543 991 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 IGLV10-67-201ENST00000519446 325 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC027667.1-201ENST00000545814 304 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AL355076.3-201ENST00000555838 587 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 MRPS21P9-201ENST00000571150 257 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC136944.5-201ENST00000573021 151 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 RBM4-213ENST00000578778 582 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AP004247.4-201ENST00000608484 942 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 MIAT_exon1.1-201ENST00000617016 135 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC005383.1-201ENST00000622689 534 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms