Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 RN7SL282P-201ENST00000479676 297 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 RN7SL647P-201ENST00000485429 300 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 ST13P6-201ENST00000522430 1102 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE4BO95155 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE4BO95155 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 SNORD91A-202ENST00000609620 191 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 AL139123.1-201ENST00000612008 430 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 AL121985.2-201ENST00000621192 555 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE4BO95155 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 AL162171.3-201ENST00000617439 3178 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
UBE4BO95155 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
UBE4BO95155 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
UBE4BO95155 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
UBE4BO95155 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
UBE4BO95155 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 ARMCX7P-201ENST00000372828 562 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.04□□□□□ -1.12
UBE4BO95155 TAS2R2P-201ENST00000421146 910 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC073900.1-201ENST00000429766 776 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 NUCKS1P1-201ENST00000452067 703 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC018892.2-201ENST00000457656 693 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 TAAR3P-201ENST00000466706 1078 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 RN7SL91P-201ENST00000469313 291 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 TAAR3P-202ENST00000481759 1025 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 OR7E163P-201ENST00000505943 894 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 AC027801.3-201ENST00000515049 698 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC068631.3-201ENST00000538831 225 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.04□□□□□ -1.12
UBE4BO95155 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.04□□□□□ -1.12
UBE4BO95155 AL121583.1-201ENST00000612444 682 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC087072.2-201ENST00000621060 682 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 AC116631.1-202ENST00000640984 683 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 AC020978.8-201ENST00000571975 3022 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE4BO95155 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
UBE4BO95155 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE4BO95155 RN7SKP23-201ENST00000625159 4301 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
UBE4BO95155 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.04□□□□□ -1.12
UBE4BO95155 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
UBE4BO95155 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
UBE4BO95155 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.03□□□□□ -1.12
UBE4BO95155 NHP2P2-201ENST00000396362 460 ntBASIC8.03□□□□□ -1.12
UBE4BO95155 AC093107.1-201ENST00000422772 609 ntBASIC8.03□□□□□ -1.12
UBE4BO95155 SLC25A24P1-202ENST00000434803 1220 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms