Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL022100.1-202ENST00000421214 548 ntBASIC6.78□□□□□ -1.32
P04436 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 RPL5P27-201ENST00000437011 881 ntBASIC6.78□□□□□ -1.32
P04436 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 RN7SL251P-201ENST00000464175 297 ntBASIC6.78□□□□□ -1.32
P04436 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 RPS14P7-201ENST00000473701 448 ntBASIC6.78□□□□□ -1.32
P04436 AL928654.1-201ENST00000476081 354 ntBASIC6.78□□□□□ -1.32
P04436 AC106760.2-201ENST00000504159 619 ntBASIC6.78□□□□□ -1.32
P04436 AC134698.1-201ENST00000511619 643 ntBASIC6.78□□□□□ -1.32
P04436 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.78□□□□□ -1.32
P04436 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 AL356800.1-201ENST00000553339 735 ntBASIC6.78□□□□□ -1.32
P04436 AC138749.2-201ENST00000566048 167 ntBASIC6.78□□□□□ -1.32
P04436 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.78□□□□□ -1.32
P04436 RN7SL689P-201ENST00000577215 297 ntBASIC6.78□□□□□ -1.32
P04436 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.78□□□□□ -1.32
P04436 AL589765.5-201ENST00000596133 515 ntBASIC6.78□□□□□ -1.32
P04436 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.78□□□□□ -1.32
P04436 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.78□□□□□ -1.32
P04436 AL136139.1-201ENST00000605568 222 ntBASIC6.78□□□□□ -1.32
P04436 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.78□□□□□ -1.32
P04436 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
P04436 AC026367.2-201ENST00000610630 553 ntBASIC6.78□□□□□ -1.32
P04436 uc_338.37-201ENST00000620113 186 ntBASIC6.78□□□□□ -1.32
P04436 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.78□□□□□ -1.32
P04436 AC097634.1-201ENST00000604491 2467 ntBASIC6.78□□□□□ -1.32
P04436 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
P04436 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P04436 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.78□□□□□ -1.32
P04436 MAPK10-281ENST00000641170 3070 ntBASIC6.78□□□□□ -1.32
P04436 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
P04436 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
P04436 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
P04436 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
P04436 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC6.77□□□□□ -1.33
P04436 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 WNK1-220ENST00000574564 1401 ntBASIC6.77□□□□□ -1.33
P04436 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
P04436 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.77□□□□□ -1.33
P04436 RPL10P16-201ENST00000325000 645 ntBASIC6.77□□□□□ -1.33
P04436 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
P04436 RNA5SP231-201ENST00000410496 138 ntBASIC6.77□□□□□ -1.33
P04436 AC068138.1-201ENST00000412635 217 ntBASIC6.77□□□□□ -1.33
P04436 RBM22P7-201ENST00000421321 280 ntBASIC6.77□□□□□ -1.33
P04436 AL645936.2-201ENST00000430565 928 ntBASIC6.77□□□□□ -1.33
P04436 ANKRD54P1-201ENST00000433115 471 ntBASIC6.77□□□□□ -1.33
P04436 Z83313.1-201ENST00000433780 718 ntBASIC6.77□□□□□ -1.33
P04436 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.77□□□□□ -1.33
P04436 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 RN7SL152P-201ENST00000484176 298 ntBASIC6.77□□□□□ -1.33
P04436 AC009153.1-201ENST00000485799 496 ntBASIC6.77□□□□□ -1.33
P04436 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.77□□□□□ -1.33
P04436 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.77□□□□□ -1.33
P04436 AC068790.1-201ENST00000536166 355 ntBASIC6.77□□□□□ -1.33
P04436 ATP5J2P4-201ENST00000538774 267 ntBASIC6.77□□□□□ -1.33
P04436 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.77□□□□□ -1.33
P04436 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.77□□□□□ -1.33
P04436 RPS7P1-201ENST00000571702 585 ntBASIC6.77□□□□□ -1.33
P04436 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
P04436 AC090774.2-201ENST00000584708 322 ntBASIC6.77□□□□□ -1.33
P04436 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.77□□□□□ -1.33
P04436 FXYD6P1-201ENST00000604857 285 ntBASIC6.77□□□□□ -1.33
P04436 AL353807.4-201ENST00000604995 257 ntBASIC6.77□□□□□ -1.33
P04436 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
P04436 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.77□□□□□ -1.33
P04436 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
P04436 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
P04436 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.77□□□□□ -1.33
P04436 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.77□□□□□ -1.33
P04436 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.77□□□□□ -1.33
P04436 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P04436 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms