Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AC006116.1-201ENST00000587908 2171 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 RNA5SP302-201ENST00000364896 100 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 MTND1P10-201ENST00000426108 832 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AC019080.2-201ENST00000453859 394 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 RPL36AP55-201ENST00000454114 305 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 OR4C1P-201ENST00000530880 937 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AP004607.5-201ENST00000532034 217 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 RN7SL178P-201ENST00000582930 304 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 uc_338.37-201ENST00000620113 186 ntBASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AL627308.2-201ENST00000420014 432 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AF274573.1-201ENST00000430535 494 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC079781.1-201ENST00000441505 394 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AL928654.1-201ENST00000476081 354 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC138749.2-201ENST00000566048 167 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC090241.1-201ENST00000587732 621 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 AC007347.2-201ENST00000623044 180 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HMG20BQ9P0W2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 SNORA11D-201ENST00000408548 128 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 SNORA11E-201ENST00000408778 128 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 Z83313.1-201ENST00000433780 718 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 DBIL5P2-201ENST00000443827 253 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AC234771.3-201ENST00000454984 622 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 CBX5P1-201ENST00000468470 561 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 RPS10P28-201ENST00000480396 498 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 OR7E163P-201ENST00000505943 894 ntBASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.97□□□□□ -0.97
HMG20BQ9P0W2 AP005597.2-201ENST00000526238 341 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms