Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC126323.4-201ENST00000566935 234 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 RN7SL131P-201ENST00000579043 256 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC078909.2-201ENST00000620584 398 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC211433.3-201ENST00000623770 375 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC022743.1-201ENST00000624990 664 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC090643.1-201ENST00000623600 3100 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.71□□□□□ -1.01
HLA-DOAP06340 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
HLA-DOAP06340 FADS2P1-201ENST00000611807 1446 ntBASIC8.71□□□□□ -1.01
HLA-DOAP06340 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.71□□□□□ -1.01
HLA-DOAP06340 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
HLA-DOAP06340 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-DOAP06340 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-DOAP06340 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
HLA-DOAP06340 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-DOAP06340 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 RAC1P4-201ENST00000419413 579 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 AL627308.2-201ENST00000420014 432 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 RN7SL392P-201ENST00000473024 299 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC108120.1-201ENST00000506543 991 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 LINC01085-203ENST00000511195 326 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 OR5F2P-201ENST00000532761 941 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 OR7E161P-201ENST00000533722 967 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC027271.1-201ENST00000610270 610 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC138627.1-203ENST00000641872 1680 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC068860.1-201ENST00000623701 3736 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 AC093844.1-201ENST00000514910 1361 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.71□□□□□ -1.02
HLA-DOAP06340 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-DOAP06340 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
HLA-DOAP06340 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 RNA5SP429-201ENST00000363688 109 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 SNORA70.8-201ENST00000384231 136 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 MRPL32P1-201ENST00000406301 247 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 NRIR-202ENST00000414795 506 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 YY1P1-201ENST00000427625 668 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 PHB2P1-201ENST00000434943 890 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 DBIL5P2-201ENST00000443827 253 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 RHEBP1-201ENST00000448647 556 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC093325.1-201ENST00000508378 326 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 RPL7L1P7-201ENST00000509986 724 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC008417.1-201ENST00000510014 565 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AL356800.1-201ENST00000553339 735 ntBASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms