Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC027313.1-201ENST00000509159 1666 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 OR9K2-201ENST00000305377 1122 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL139327.1-201ENST00000382988 348 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 MED15P8-201ENST00000411601 545 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RPL4P4-201ENST00000422486 1284 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL390026.1-201ENST00000456647 457 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 TDGF1P6-201ENST00000463873 448 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC026254.2-201ENST00000475295 371 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL332P-201ENST00000482163 254 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL635P-201ENST00000492123 296 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL519P-201ENST00000497925 288 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC114300.1-201ENST00000502347 280 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AP003385.2-201ENST00000524910 973 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL137802.2-201ENST00000562878 1110 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 SNRPCP20-201ENST00000588011 210 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC005518.2-201ENST00000603254 282 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL451085.1-201ENST00000604546 690 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AL136141.1-201ENST00000605780 369 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 CD86-209ENST00000493101 1572 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 ATP5A1P10-201ENST00000622403 1603 ntBASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 MSRB1P1-201ENST00000396851 354 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 AC092952.1-201ENST00000397646 1209 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 OR4F7P-201ENST00000402444 931 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 OR4F1P-201ENST00000405102 938 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 GAS8-AS1-201ENST00000408886 435 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 CRIP1P3-201ENST00000416794 220 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 OR4F2P-201ENST00000424047 938 ntBASIC5.65□□□□□ -1.5
HLA-DRB4X5D2U9 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms