Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 AC138627.1-203ENST00000641872 1680 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSX3Q99909 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 AL049634.1-201ENST00000453770 1720 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX3Q99909 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 CREM-218ENST00000460270 1416 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 ZNF300P1-201ENST00000356555 1822 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX3Q99909 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 MSRB1P1-201ENST00000396851 354 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AL035698.1-201ENST00000405812 564 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 RPSAP59-201ENST00000421048 890 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AL671986.1-201ENST00000422197 955 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX3Q99909 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 AP002383.1-201ENST00000439405 720 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 EFCAB14P1-201ENST00000442409 463 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AC239798.1-201ENST00000449024 1176 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX3Q99909 AL122013.1-201ENST00000473054 801 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AC109811.2-201ENST00000509609 452 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 OR4A9P-201ENST00000526326 944 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 UBE2Q2P11-201ENST00000559691 205 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX3Q99909 MRPL45P2-203ENST00000573318 473 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 AC243772.3-202ENST00000609662 1148 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX3Q99909 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 AC241585.4-201ENST00000640951 686 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 AC087885.1-201ENST00000641910 848 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX3Q99909 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX3Q99909 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 KDELC1P1-201ENST00000512118 1509 ntBASIC6.44□□□□□ -1.38
SSX3Q99909 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SSX3Q99909 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX3Q99909 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
SSX3Q99909 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 AL449283.1-201ENST00000602631 3403 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 AL138847.1-201ENST00000258651 546 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 OR56A1-201ENST00000316650 1071 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC130472.1-201ENST00000427885 309 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 Z98752.2-201ENST00000432727 312 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX3Q99909 ARL2BPP7-201ENST00000446421 490 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 RN7SL870P-201ENST00000460111 296 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms