Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC063923.2-201ENST00000562158 928 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC244034.2-201ENST00000562504 509 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC074051.4-201ENST00000564888 892 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 RBM22P13-201ENST00000569805 1244 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 OR2AH1P-202ENST00000641232 2744 ntBASIC7.87□□□□□ -1.15
CCDC50Q8IVM0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 TMED5-201ENST00000370280 750 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 SNORA68-201ENST00000384437 133 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 U3.31-201ENST00000408113 216 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 CTSLP8-201ENST00000413075 967 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 VN1R35P-201ENST00000428102 693 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 RN7SL36P-201ENST00000469345 276 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 RN7SL241P-201ENST00000482973 236 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC233724.10-201ENST00000510454 409 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 RN7SL3-201ENST00000610674 299 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 AC073488.8-201ENST00000631952 757 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 MFSD8-234ENST00000641503 1082 ntBASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC50Q8IVM0 BRD7P6-201ENST00000431406 1860 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 MIR498-201ENST00000385134 124 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 RN7SKP168-201ENST00000410910 300 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 OR10U1P-201ENST00000414690 905 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 FABP5P1-201ENST00000423401 411 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 FABP5P2-201ENST00000439042 408 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms