Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Z82198.3-201ENST00000421145 199 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 EEF1GP7-201ENST00000422983 703 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 Z83313.1-201ENST00000433780 718 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 BX005266.3-201ENST00000443013 1075 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC9.33□□□□□ -0.92
COL15A1P39059 RN7SL153P-201ENST00000486501 292 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 RN7SL306P-201ENST00000492941 296 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 AC008417.1-201ENST00000510014 565 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC9.33□□□□□ -0.92
COL15A1P39059 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 BTG1P1-201ENST00000540396 508 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 RN7SL178P-201ENST00000582930 304 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 MIR4470-201ENST00000583453 72 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC9.33□□□□□ -0.92
COL15A1P39059 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 MIR6780B-201ENST00000610307 79 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
COL15A1P39059 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
COL15A1P39059 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC9.32□□□□□ -0.92
COL15A1P39059 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC9.32□□□□□ -0.92
COL15A1P39059 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
COL15A1P39059 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 RN7SKP221-201ENST00000410420 301 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 AC091492.1-201ENST00000419844 272 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 PMS2P11-201ENST00000451831 574 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 AC022080.2-201ENST00000452932 533 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 NACAP5-201ENST00000509863 636 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 AL356800.1-201ENST00000553339 735 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC9.32□□□□□ -0.92
COL15A1P39059 AC015819.1-201ENST00000613588 663 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
COL15A1P39059 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC9.32□□□□□ -0.92
COL15A1P39059 AC135068.11-201ENST00000636378 921 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 OR7E161P-202ENST00000641994 1033 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
COL15A1P39059 AC006116.1-201ENST00000587908 2171 ntBASIC9.32□□□□□ -0.92
COL15A1P39059 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
COL15A1P39059 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 AC009108.3-201ENST00000602739 3515 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 ARHGAP42P5-201ENST00000548856 2936 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 RPL18AP14-201ENST00000417685 526 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 AL672212.1-201ENST00000422246 400 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 NPM1P30-201ENST00000425092 828 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 RN7SL868P-201ENST00000485915 303 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC9.31□□□□□ -0.92
COL15A1P39059 IGHVIII-25-1-201ENST00000522143 241 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 AL031846.1-201ENST00000560933 314 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 AC105275.2-201ENST00000567907 711 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 WDR45BP1-201ENST00000583470 1029 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 RPSAP66-201ENST00000592196 606 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms