Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
FREM3P0C091 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FREM3P0C091 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.74□□□□□ -1.33
FREM3P0C091 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
FREM3P0C091 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
FREM3P0C091 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
FREM3P0C091 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FREM3P0C091 CD200-202ENST00000383681 1997 ntTSL 2 BASIC6.74□□□□□ -1.33
FREM3P0C091 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FREM3P0C091 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 AL354983.1-201ENST00000434580 906 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC106760.2-201ENST00000504159 619 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 SCARNA18.2-201ENST00000516882 84 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 PTTG3P-201ENST00000521862 606 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC090132.1-201ENST00000524071 1480 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC087257.2-201ENST00000538759 928 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 CCDC58P1-201ENST00000578567 430 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC241377.2-202ENST00000636462 997 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC009948.5-201ENST00000624360 4406 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 AC011008.2-201ENST00000624866 3352 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC073065.1-201ENST00000411678 2866 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC133552.3-201ENST00000572236 1869 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 NPM1P14-201ENST00000343743 866 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 RNU1-38P-201ENST00000362817 144 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 RN7SKP63-201ENST00000363187 301 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 RN7SKP131-201ENST00000410698 301 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.73□□□□□ -1.33
FREM3P0C091 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC104698.1-201ENST00000435671 276 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 AC234771.3-201ENST00000454984 622 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC095059.2-201ENST00000510601 933 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC126177.6-201ENST00000550420 1009 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 RPSAP66-201ENST00000592196 606 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 AC012510.1-201ENST00000607946 759 ntBASIC6.73□□□□□ -1.33
FREM3P0C091 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
FREM3P0C091 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
FREM3P0C091 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FREM3P0C091 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 SF3A3P1-201ENST00000446317 1477 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 RPL5P8-201ENST00000396820 815 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 RNA5SP177-201ENST00000410122 107 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 WBP1LP1-201ENST00000460451 896 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 GAPDHP61-201ENST00000507324 1005 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 IGLV1-62-201ENST00000518003 441 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 ATP5J2P4-201ENST00000538774 267 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 AC023080.1-201ENST00000551663 931 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms