Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 CASC19-243ENST00000641588 1546 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RNA5SP263-201ENST00000363376 128 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 BEND6-201ENST00000370745 579 ntTSL 5 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SNORA10B-201ENST00000384458 133 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RFKP1-201ENST00000400940 428 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL773545.3-201ENST00000414297 706 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 FABP5P1-201ENST00000423401 411 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL354794.2-201ENST00000424795 1248 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RANP5-201ENST00000427731 655 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RPL22P11-201ENST00000434894 385 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC016734.1-201ENST00000436998 654 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 FABP5P2-201ENST00000439042 408 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RHEBP1-201ENST00000448647 556 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC239798.1-201ENST00000449024 1176 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL590648.1-201ENST00000456479 460 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SL272P-201ENST00000487762 289 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL031864.2-201ENST00000498507 350 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC112225.1-201ENST00000508230 297 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC093063.1-201ENST00000599317 363 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 YTHDF2P1-201ENST00000604759 1271 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AP005329.3-201ENST00000609924 686 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC090373.1-201ENST00000623955 603 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC241585.4-201ENST00000640951 686 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC089998.1-201ENST00000548575 3141 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC241584.2-201ENST00000637142 2090 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF300P1-201ENST00000356555 1822 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC063923.1-201ENST00000478982 1619 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 OR5E1P-201ENST00000305754 927 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 RNU1-24P-201ENST00000364285 165 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 RBBP4P4-201ENST00000398588 1289 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 HMGN2P24-201ENST00000433516 273 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AP006193.1-201ENST00000440724 485 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms