Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 OR52K3P-202ENST00000641797 1729 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 KRT18P52-201ENST00000404956 846 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AC023141.10-201ENST00000415634 200 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.79□□□□□ -1.16
SLC1A1P43005 RN7SL124P-201ENST00000498656 285 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AP006587.2-201ENST00000530696 493 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 OR7E96P-201ENST00000530816 976 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.79□□□□□ -1.16
SLC1A1P43005 MIR3689F-201ENST00000579617 66 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC004852.1-201ENST00000605206 154 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AL136141.1-201ENST00000605780 369 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SLC1A1P43005 MIR6723-201ENST00000621981 89 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC074198.1-201ENST00000506546 1397 ntBASIC7.79□□□□□ -1.16
SLC1A1P43005 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.79□□□□□ -1.16
SLC1A1P43005 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL078621.1-201ENST00000272567 768 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL390039.1-201ENST00000399148 611 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 BX119917.1-201ENST00000432517 502 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 RPS29P5-201ENST00000452777 171 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AC012493.1-201ENST00000453252 760 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC026336.1-201ENST00000466577 351 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AC015820.1-201ENST00000473882 321 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AC008799.2-201ENST00000484429 647 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC008677.3-201ENST00000519146 666 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AP001124.1-201ENST00000529628 385 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 DNM1P31-201ENST00000564149 696 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 MIR4793-201ENST00000577502 87 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AC022239.4-201ENST00000602626 504 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 AL121985.2-201ENST00000621192 555 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL357556.1-201ENST00000421884 1388 ntBASIC7.78□□□□□ -1.16
SLC1A1P43005 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SLC1A1P43005 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms