Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 uc_338.21-201ENST00000622458 147 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC007347.2-201ENST00000623044 180 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC093909.6-201ENST00000624757 775 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.8□□□□□ -1
HLA-DOAP06340 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 RN7SKP137-201ENST00000411074 307 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC105391.1-201ENST00000503155 1045 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AC017007.1-201ENST00000511960 415 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 RN7SKP64-201ENST00000517206 328 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 OR5M4P-201ENST00000529436 925 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 NDUFA3P2-201ENST00000531434 232 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC233290.1-201ENST00000553021 1186 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC040162.2-201ENST00000573092 157 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 AC005070.1-201ENST00000603744 365 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 PTCHD3P1-201ENST00000612350 537 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AL161931.1-201ENST00000612768 246 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 MIR6883-201ENST00000614952 78 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC8.8□□□□□ -1
HLA-DOAP06340 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
HLA-DOAP06340 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 UBTFL11-201ENST00000428234 2252 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HLA-DOAP06340 AC104581.5-201ENST00000624171 7141 ntBASIC8.8□□□□□ -1
HLA-DOAP06340 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.8□□□□□ -1
HLA-DOAP06340 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.8□□□□□ -1
HLA-DOAP06340 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HLA-DOAP06340 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HLA-DOAP06340 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 EIF4BP5-201ENST00000567338 1795 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.79□□□□□ -1
HLA-DOAP06340 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HLA-DOAP06340 OR5M2P-202ENST00000641241 4242 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HLA-DOAP06340 MIR575-201ENST00000385013 94 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 PPIAP23-201ENST00000420099 497 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 AL359633.1-201ENST00000421403 310 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 RPL5P27-201ENST00000437011 881 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
HLA-DOAP06340 HNRNPA1P17-201ENST00000496620 924 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
HLA-DOAP06340 MIR6774-201ENST00000614651 70 ntBASIC8.79□□□□□ -1
HLA-DOAP06340 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.79□□□□□ -1
HLA-DOAP06340 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms