Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 PCDHAC2-203ENST00000615316 3011 ntBASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 PTBP1P-201ENST00000554374 1601 ntBASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB13Q9Y5F0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHB13Q9Y5F0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 STK33P1-201ENST00000423835 1218 ntBASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 MYC-209ENST00000641252 345 ntBASIC22.14■■□□□ 1.13
PCDHB13Q9Y5F0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 AC069152.1-201ENST00000438030 544 ntBASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 AC023632.3-201ENST00000521633 145 ntBASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 KRT8P17-201ENST00000453110 1448 ntBASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB13Q9Y5F0 AC112907.3-201ENST00000577781 2400 ntBASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB13Q9Y5F0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 AL355802.2-201ENST00000402069 882 ntBASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 AL031963.3-201ENST00000606441 850 ntBASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 Z99916.3-201ENST00000623422 1080 ntBASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 KRT8P20-201ENST00000423953 1409 ntBASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB13Q9Y5F0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms