Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 AC092118.2-201ENST00000613495 667 ntBASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4E1Q9UPM8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 AL109923.1-201ENST00000618799 583 ntBASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.84■□□□□ 0.93
AP4E1Q9UPM8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 DUSP5P2-201ENST00000426873 1033 ntBASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.83■□□□□ 0.93
AP4E1Q9UPM8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
AP4E1Q9UPM8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4E1Q9UPM8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
AP4E1Q9UPM8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4E1Q9UPM8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
AP4E1Q9UPM8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 TCF3P1-201ENST00000423021 1937 ntBASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 AL031963.3-201ENST00000606441 850 ntBASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4E1Q9UPM8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 KRT8P17-201ENST00000453110 1448 ntBASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 MIR4758-201ENST00000577688 71 ntBASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 AC104771.1-201ENST00000603335 964 ntBASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4E1Q9UPM8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms