Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TSPY14P-201ENST00000303979 915 ntBASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 AC063952.2-201ENST00000498792 1227 ntBASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 AL031985.4-201ENST00000642138 673 ntBASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CXXC1Q9P0U4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CXXC1Q9P0U4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 CRYGFP-201ENST00000418459 633 ntBASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 AP005242.2-201ENST00000580065 1175 ntBASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 FAM87A-204ENST00000613235 858 ntBASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CXXC1Q9P0U4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CXXC1Q9P0U4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CXXC1Q9P0U4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CXXC1Q9P0U4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 BX664615.1-201ENST00000443558 458 ntBASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 KRT18P56-201ENST00000507275 550 ntBASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.64■■□□□ 1.05
CXXC1Q9P0U4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 AC117947.1-201ENST00000427448 529 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 KRT126P-201ENST00000549467 1181 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 MIR2861-201ENST00000636310 90 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 MYC-208ENST00000641036 567 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CXXC1Q9P0U4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms