Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 AC092437.1-201ENST00000624794 1048 ntBASIC18.09■□□□□ 0.49
HINT3Q9NQE9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HINT3Q9NQE9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HINT3Q9NQE9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 FAM21FP-204ENST00000608637 956 ntBASIC18.08■□□□□ 0.48
HINT3Q9NQE9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HINT3Q9NQE9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 AC004911.1-201ENST00000416316 871 ntBASIC18.07■□□□□ 0.48
HINT3Q9NQE9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 KRT18P11-201ENST00000435214 1283 ntBASIC18.07■□□□□ 0.48
HINT3Q9NQE9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 AL020996.1-203ENST00000536896 2307 ntBASIC18.07■□□□□ 0.48
HINT3Q9NQE9 AC098818.2-201ENST00000564925 2320 ntBASIC18.07■□□□□ 0.48
HINT3Q9NQE9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
HINT3Q9NQE9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HINT3Q9NQE9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms