Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL137060.1-201ENST00000618151 2648 ntBASIC21.75■■□□□ 1.07
NXF3Q9H4D5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NXF3Q9H4D5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NXF3Q9H4D5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 MIR718-201ENST00000390190 70 ntBASIC21.74■■□□□ 1.07
NXF3Q9H4D5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 AL121829.2-201ENST00000620908 328 ntBASIC21.74■■□□□ 1.07
NXF3Q9H4D5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NXF3Q9H4D5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 PRKY-204ENST00000533551 1019 ntBASIC21.73■■□□□ 1.07
NXF3Q9H4D5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.73■■□□□ 1.07
NXF3Q9H4D5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.72■■□□□ 1.07
NXF3Q9H4D5 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
NXF3Q9H4D5 KRT8P17-201ENST00000453110 1448 ntBASIC21.72■■□□□ 1.07
NXF3Q9H4D5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 AL121906.2-201ENST00000621597 723 ntBASIC21.71■■□□□ 1.07
NXF3Q9H4D5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NXF3Q9H4D5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NXF3Q9H4D5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms