Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC010536.3-201ENST00000620306 533 ntBASIC22.03■■□□□ 1.12
VPS16Q9H269 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS16Q9H269 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS16Q9H269 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS16Q9H269 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS16Q9H269 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
VPS16Q9H269 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
VPS16Q9H269 TMEM179-206ENST00000616017 1645 ntBASIC22.02■■□□□ 1.12
VPS16Q9H269 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.02■■□□□ 1.12
VPS16Q9H269 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.02■■□□□ 1.12
VPS16Q9H269 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
VPS16Q9H269 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
VPS16Q9H269 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
VPS16Q9H269 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.02■■□□□ 1.12
VPS16Q9H269 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.02■■□□□ 1.12
VPS16Q9H269 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.02■■□□□ 1.12
VPS16Q9H269 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.02■■□□□ 1.12
VPS16Q9H269 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
VPS16Q9H269 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.02■■□□□ 1.12
VPS16Q9H269 AL591742.1-201ENST00000604433 565 ntBASIC22.02■■□□□ 1.12
VPS16Q9H269 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.02■■□□□ 1.12
VPS16Q9H269 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 AC087633.2-202ENST00000565166 1439 ntBASIC22.02■■□□□ 1.12
VPS16Q9H269 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS16Q9H269 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
VPS16Q9H269 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS16Q9H269 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS16Q9H269 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.01■■□□□ 1.11
VPS16Q9H269 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
VPS16Q9H269 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS16Q9H269 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.01■■□□□ 1.11
VPS16Q9H269 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 CYP21A1P-202ENST00000354927 1481 ntBASIC22.01■■□□□ 1.11
VPS16Q9H269 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS16Q9H269 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
VPS16Q9H269 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
VPS16Q9H269 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS16Q9H269 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22■■□□□ 1.11
VPS16Q9H269 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22■■□□□ 1.11
VPS16Q9H269 AC016405.3-201ENST00000607710 860 ntBASIC22■■□□□ 1.11
VPS16Q9H269 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22■■□□□ 1.11
VPS16Q9H269 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22■■□□□ 1.11
VPS16Q9H269 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
VPS16Q9H269 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS16Q9H269 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.99■■□□□ 1.11
VPS16Q9H269 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
VPS16Q9H269 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 PGM5P4-201ENST00000421970 445 ntBASIC21.99■■□□□ 1.11
VPS16Q9H269 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.99■■□□□ 1.11
VPS16Q9H269 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.99■■□□□ 1.11
VPS16Q9H269 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VPS16Q9H269 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS16Q9H269 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.98■■□□□ 1.11
VPS16Q9H269 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.98■■□□□ 1.11
VPS16Q9H269 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS16Q9H269 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
VPS16Q9H269 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS16Q9H269 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.98■■□□□ 1.11
VPS16Q9H269 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.98■■□□□ 1.11
VPS16Q9H269 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
VPS16Q9H269 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.98■■□□□ 1.11
VPS16Q9H269 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS16Q9H269 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
VPS16Q9H269 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
VPS16Q9H269 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS16Q9H269 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.98■■□□□ 1.11
VPS16Q9H269 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms