Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 AC005229.4-201ENST00000610085 2198 ntBASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 PRORSD1P-201ENST00000295112 541 ntBASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 AC008687.6-201ENST00000596318 630 ntBASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 AC073648.6-201ENST00000641589 218 ntBASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.73■□□□□ 0.27
SSBP3Q9BWW4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSBP3Q9BWW4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 POM121L13P-201ENST00000422362 380 ntBASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 AC006557.6-201ENST00000623071 864 ntBASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSBP3Q9BWW4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SSBP3Q9BWW4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 AC023632.3-201ENST00000521633 145 ntBASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 AL121603.2-201ENST00000557373 2117 ntBASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SSBP3Q9BWW4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms