Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 AL031008.1-201ENST00000619963 541 ntBASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 AL023973.1-201ENST00000624619 620 ntBASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 HMGN1P19-201ENST00000436976 333 ntBASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AC007663.1-201ENST00000438948 1240 ntBASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AC092329.2-201ENST00000598402 547 ntBASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AC104692.2-201ENST00000603054 253 ntBASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 AL445675.2-201ENST00000620291 557 ntBASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.22■□□□□ 0.83
LRFN3Q9BTN0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 AL160237.2-201ENST00000556165 472 ntBASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 AC022898.2-201ENST00000616822 1312 ntBASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
LRFN3Q9BTN0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 AC079776.4-201ENST00000511039 504 ntBASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 AC023632.3-201ENST00000521633 145 ntBASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 AC083849.1-201ENST00000615227 514 ntBASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN3Q9BTN0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 EMBP1-201ENST00000458200 901 ntBASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.19■□□□□ 0.82
LRFN3Q9BTN0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN3Q9BTN0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 FAM220CP-201ENST00000395253 831 ntBASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 AC112907.2-201ENST00000448639 330 ntBASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 IFNL4P1-201ENST00000607083 540 ntBASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN3Q9BTN0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms