Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
VRK1Q99986 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VRK1Q99986 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 TMEM191A-211ENST00000637163 1067 ntBASIC17.64■□□□□ 0.41
VRK1Q99986 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.64■□□□□ 0.41
VRK1Q99986 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 AFG3L1P-217ENST00000557444 2447 ntBASIC17.63■□□□□ 0.41
VRK1Q99986 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK1Q99986 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
VRK1Q99986 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK1Q99986 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK1Q99986 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
VRK1Q99986 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.63■□□□□ 0.41
VRK1Q99986 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.63■□□□□ 0.41
VRK1Q99986 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.63■□□□□ 0.41
VRK1Q99986 FAM21FP-204ENST00000608637 956 ntBASIC17.63■□□□□ 0.41
VRK1Q99986 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VRK1Q99986 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK1Q99986 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK1Q99986 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK1Q99986 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.63■□□□□ 0.41
VRK1Q99986 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK1Q99986 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.63■□□□□ 0.41
VRK1Q99986 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VRK1Q99986 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.62■□□□□ 0.41
VRK1Q99986 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VRK1Q99986 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VRK1Q99986 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VRK1Q99986 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK1Q99986 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VRK1Q99986 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VRK1Q99986 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.61■□□□□ 0.41
VRK1Q99986 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
VRK1Q99986 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 AL355472.2-201ENST00000422958 438 ntBASIC17.61■□□□□ 0.41
VRK1Q99986 AC007322.3-201ENST00000426526 701 ntBASIC17.61■□□□□ 0.41
VRK1Q99986 DUSP5P2-201ENST00000426873 1033 ntBASIC17.61■□□□□ 0.41
VRK1Q99986 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VRK1Q99986 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.61■□□□□ 0.41
VRK1Q99986 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.61■□□□□ 0.41
VRK1Q99986 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.61■□□□□ 0.41
VRK1Q99986 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.61■□□□□ 0.41
VRK1Q99986 MIR4651-201ENST00000582622 73 ntBASIC17.61■□□□□ 0.41
VRK1Q99986 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.61■□□□□ 0.41
VRK1Q99986 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VRK1Q99986 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
VRK1Q99986 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK1Q99986 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.6■□□□□ 0.41
VRK1Q99986 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.6■□□□□ 0.41
VRK1Q99986 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.6■□□□□ 0.41
VRK1Q99986 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.6■□□□□ 0.41
VRK1Q99986 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VRK1Q99986 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.6■□□□□ 0.41
VRK1Q99986 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms