Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 BX119927.1-201ENST00000636596 1552 ntBASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TUBGCP3Q96CW5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 TMEM179-206ENST00000616017 1645 ntBASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TUBGCP3Q96CW5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 MIR638-201ENST00000385237 100 ntBASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBGCP3Q96CW5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 KRT19P1-201ENST00000405746 1186 ntBASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 AC097381.1-201ENST00000429019 1296 ntBASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 RNF165-205ENST00000588679 2904 ntBASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBGCP3Q96CW5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBGCP3Q96CW5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms