Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APH1AQ96BI3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
APH1AQ96BI3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.78■□□□□ 0.44
APH1AQ96BI3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APH1AQ96BI3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APH1AQ96BI3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
APH1AQ96BI3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.78■□□□□ 0.44
APH1AQ96BI3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APH1AQ96BI3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APH1AQ96BI3 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 AP003097.1-201ENST00000530657 1135 ntBASIC17.77■□□□□ 0.44
APH1AQ96BI3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
APH1AQ96BI3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APH1AQ96BI3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
APH1AQ96BI3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.77■□□□□ 0.43
APH1AQ96BI3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.77■□□□□ 0.43
APH1AQ96BI3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APH1AQ96BI3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 KRT8P20-201ENST00000423953 1409 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 ESRRAP1-201ENST00000400596 1257 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 TSPY20P-201ENST00000450910 630 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 AC026366.1-201ENST00000488803 879 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 AL031963.3-201ENST00000606441 850 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.76■□□□□ 0.43
APH1AQ96BI3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 AC020907.5-201ENST00000624372 1936 ntBASIC17.76■□□□□ 0.43
APH1AQ96BI3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APH1AQ96BI3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 POU5F1P3-201ENST00000428824 1078 ntBASIC17.75■□□□□ 0.43
APH1AQ96BI3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 UNC93B4-201ENST00000505679 747 ntBASIC17.75■□□□□ 0.43
APH1AQ96BI3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 AC006557.6-201ENST00000623071 864 ntBASIC17.75■□□□□ 0.43
APH1AQ96BI3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APH1AQ96BI3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 PTBP1P-201ENST00000554374 1601 ntBASIC17.75■□□□□ 0.43
APH1AQ96BI3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
APH1AQ96BI3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.74■□□□□ 0.43
APH1AQ96BI3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms